From eb8fb07869a2f024e2746fc8881b91640dfb42bb Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Mon, 6 Apr 2026 11:01:47 +0200 Subject: gnu: r-txdbmaker: Replace custom phase with SKIPPED-TESTS argument. * gnu/packages/bioconductor.scm (r-txdbmaker)[arguments]: Remove phase 'delete-bad-tests; specify #:skipped-tests instead. Change-Id: I35e1fb2dce920cb0a59a063eb2b511b636e46546 --- gnu/packages/bioconductor.scm | 13 +++++-------- 1 file changed, 5 insertions(+), 8 deletions(-) (limited to 'gnu') diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 20fe9fd489..870e1e993c 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -15078,14 +15078,11 @@ dependencies between GO terms can be implemented and applied.") (build-system r-build-system) (arguments (list - #:phases - '(modify-phases %standard-phases - (add-after 'unpack 'delete-bad-tests - (lambda _ - ;; These tests attempt to download files. - (for-each delete-file - '("inst/unitTests/test_makeTxDbFromUCSC.R" - "inst/unitTests/test_makeTxDbFromBiomart.R"))))))) + #:test-directory "inst/unitTests" + #:skipped-tests + ;; These tests attempt to download files. + '("test_makeTxDbFromUCSC.R" + "test_makeTxDbFromBiomart.R"))) (propagated-inputs (list r-annotationdbi r-biobase r-biocgenerics -- cgit v1.3