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2026-01-25gnu: r-glmmtmb: Disable one test.Ricardo Wurmus
* gnu/packages/cran.scm (r-glmmtmb)[arguments]: Add phase 'disable-bad-tests. Change-Id: I67b09c9063c9a80b20839115048497226e5c4da6 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-vcr: Update to 2.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-vcr): Update to 2.1.0. [properties]: Record updater-extra-native-inputs. Change-Id: I58434aceb6b1a61bd910075c3c8cac46d2fcaffa Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-maxlik: Update to 1.5-2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-maxlik): Update to 1.5-2.2. [properties]: Record updater-extra-native-inputs. [native-inputs]: Add r-tinytest. Change-Id: I616e9660de100a4892e4b617bbeb982b5ecf91d4 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-microbiomestat: Update to 1.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-microbiomestat): Update to 1.3. [properties]: Record updater-extra-inputs and updater-extra-native-inputs. [inputs]: Add nlopt. [native-inputs]: Add pkg-config. [propagated-inputs]: Add r-bbmisc, r-dplyr, r-foreach, r-lhs, r-mlr, r-mlrmbo, r-paramhelpers, r-rcpp, r-rcpparmadillo, and r-smoof. Change-Id: Ia326065121daeacb364ab07e82d4435f228f01f7 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-paletteer: Update to 1.7.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-paletteer): Update to 1.7.0. [properties]: Record updater-extra-native-inputs. [propagated-inputs]: Add r-cli. [native-inputs]: Add r-ggplot2, r-scico, and r-vdiffr. Change-Id: I205c37c270e980e625524af30b783047aa24572d Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-futile-logger: Update to 1.4.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-futile-logger): Update to 1.4.9. [arguments]: Remove. [native-inputs]: Remove r-testthat; add r-jsonlite and r-testit. Change-Id: Ia70f807a9b9cedc5c6aa9fae94357785c685c4e1 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-yulab-utils: Update to 0.2.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-yulab-utils): Update to 0.2.3. [native-inputs]: Add r-testthat. Change-Id: I15115ce4cc0a6bef8e684bff4ac7c116fc33f055 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-aster: Update to 1.3-7.Ricardo Wurmus
* gnu/packages/cran.scm (r-aster): Update to 1.3-7. [properties]: Record updater-extra-native-inputs. Change-Id: I8a6efce45d3f4ab065a17bdc8c19fbbe82554158 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-yaml: Update to 2.3.12.Ricardo Wurmus
* gnu/packages/cran.scm (r-yaml): Update to 2.3.12. [properties]: Record updater-ignored-native-inputs; remove updater-extra-native-inputs. [native-inputs]: Remove r-runit. [arguments]: Disable tests. Change-Id: Ic32cd7734ef4628e7b795ed24ed6f06ce6b9cd91 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-wk: Update to 0.9.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-wk): Update to 0.9.5. [properties]: Remove updater-extra-native-inputs; record updater-ignored-native-inputs. [native-inputs]: Add r-png and r-readr. Change-Id: Ia9ecbd044cb23e1ab2a53bc08a6246c326808647 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-later: Update to 1.4.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-later): Update to 1.4.5. [properties]: Update updater-ignored-native-inputs list. Change-Id: Ie44814bd63f8aee2a6557e18272128ee94b4bab8 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-redland: Update to 1.0.17-19.Ricardo Wurmus
* gnu/packages/cran.scm (r-redland): Update to 1.0.17-19. Change-Id: Id0db793ffce22f3306c802ddfeb631c932ec1233 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-loo: Update to 2.9.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-loo): Update to 2.9.0. [native-inputs]: Add r-mcmcpack and r-mvtnorm. [properties]: Record updater-ignored-native-inputs. Change-Id: I5a4a465f1cec7b6516de60c2f7990e5389a1fe43 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-litedown: Update to 0.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-litedown): Update to 0.9. [properties]: Record updater-extra-native-inputs. Change-Id: I6514899e700d6f673bc2e2e6669ea14279c20054 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-ctrdata: Update to 1.25.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ctrdata): Update to 1.25.1. [source]: Update snippet to delete additional minified JavaScript file. [arguments]: Update 'process-javascript phase to process jstree source file. [propagated-inputs]: Remove r-xml2. [native-inputs]: Remove r-r-rsp; add jstree sources. Change-Id: I4abb6493aa7767a4ca72f43d42e0584b40fa2d6c Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-rcpp: Update to 1.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcpp): Update to 1.1.1. [arguments]: Skip building vignettes. Change-Id: I3252bdc60ae257ac7c24d803f4080e4c9ae08b1c Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-feather: Update to 0.4.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-feather): Update to 0.4.0. [propagated-inputs]: Add r-arrow; remove r-rcpp; move r-tibble and r-hms from here... [native-inputs]: ...to here. Change-Id: I2e52257d6af75eebdddc9a785498aed11be3479a Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-geos: Update to 0.2.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-geos): Update to 0.2.5. [properties]: Record updater-ignored-native-inputs. [native-inputs]: Add r-terra. Change-Id: I7702d35a26413792ce4d9104900384286a49c141 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-htmltools: Update to 0.5.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-htmltools): Update to 0.5.9. [properties]: Record updater-ignored-native-inputs. [arguments]: Remove. [native-inputs]: Remove r-markdown; add r-withr. Change-Id: I04c2a78dc7d4987eeef17c7cc21353624a4ad3ff Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-httr2: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-httr2): Update to 1.2.2. [properties]: Update updater-ignored-native-inputs. [native-inputs]: Add r-otel. Change-Id: I87dda0c2d5f1d1ae3d9012da19cef1e0d131ef70 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-purrr: Update to 1.2.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-purrr): Update to 1.2.1. [properties]: Record updater-extra-propagated-inputs. [native-inputs]: Move r-carrier from here... [propagated-inputs]: ...to here. Change-Id: I406f626fd41b62bda4b64a1ca3b403da62123df6 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-e1071: Update to 1.7-17.Ricardo Wurmus
* gnu/packages/cran.scm (r-e1071): Update to 1.7-17. [properties]: Record updater-extra-native-inputs. Change-Id: I9704930929ace943b6852e83fc8fc4b931031882 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-dbscan: Update to 1.2.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-dbscan): Update to 1.2.4. [properties]: Record updater-ignored-native-inputs. Change-Id: I489a41cafccc5543abc3bac8cbc75b19fb8163c8 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-extradistr: Update to 1.10.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-extradistr): Update to 1.10.0.1. Change-Id: I913bff80bec2a5e1ecfcac0cad16e484e34bd3cb Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-catdata: Update to 1.2.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-catdata): Update to 1.2.5. Change-Id: I53dd36b411b30050a84d0ea1d1f35016eee5781c Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-roi: Update to 1.0-2.Ricardo Wurmus
* gnu/packages/cran.scm (r-roi): Update to 1.0-2. [native-inputs]: Remove r-r-rsp and r-testthat. Change-Id: I91ab8c56f23138a0ba27c397b2d1e3fe3b8db8dc Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-latex2exp: Update to 0.9.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-latex2exp): Update to 0.9.8. [propagated-inputs]: Remove r-magrittr and r-stringr. [native-inputs]: Add r-rlang and r-waldo. Change-Id: Ie265ec450ba098829bfc43f671f83e3e4623eb89 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-xfun: Update to 0.55.Ricardo Wurmus
* gnu/packages/cran.scm (r-xfun): Update to 0.55. [properties]: Update list of ignored native inputs. Change-Id: I791f98c3012ebb3840a26cd631f7ed6c29da5bf7 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-timeseries: Update to 4052.112.Ricardo Wurmus
* gnu/packages/cran.scm (r-timeseries): Update to 4052.112. [properties]: Record updater-ignored-native-inputs. [native-inputs]: Remove r-runit. Change-Id: I398398d5d194be3df7517a0a74df2ef256e7b077 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-vim: Update to 7.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-vim): Update to 7.0.0. [propagated-inputs]: Add r-future, r-mlr3, r-mlr3learners, r-mlr3pipelines, r-mlr3tuning, r-paradox, and r-r6. Change-Id: I9d32ef0d9bd00707f4db052ce58bff0fb0856e2e Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-isoband: Update to 0.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-isoband): Update to 0.3.0. [propagated-inputs]: Add r-cli, r-cpp11, and r-rlang. Change-Id: I4c3baeda2383df4d7583517e30113b52efeafcd2 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-reformulas: Update to 0.4.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-reformulas): Update to 0.4.3.1. [arguments]: Add phase 'delete-bad-tests. [native-inputs]: Add r-testthat and r-tinytest. Change-Id: I18af84e0581289574b6dde003e7b13f701293907 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-parallelly: Update to 1.46.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-parallelly): Update to 1.46.1. [native-inputs]: Add openssh. Change-Id: I98ea8b0fde052e2e916d0310f9ad1977a2accea4 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-rlrsim: Update to 3.1-9.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rlrsim): Update to 3.1-9. Change-Id: I797262ce560a1e842dfe7c544cc716ddbefd6017 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-rsqlite: Update to 2.4.5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.4.5. Change-Id: Ib8eb57d138e427de30ac2ce87e54b0a7ef0ac63b Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-exactextractr: Update to 0.10.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-exactextractr): Update to 0.10.1. [native-inputs]: Add r-dplyr and r-terra. Change-Id: I466e9be5c4443a64136fcc4601ae3dfeff900a4b Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-vroom: Update to 1.6.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-vroom): Update to 1.6.7. Change-Id: Icbafc555e3feabc95568a4e085fc22d5b0f4e300 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-parsnip: Update to 1.4.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-parsnip): Update to 1.4.0. Change-Id: Id4898a899f80bfdb5ac9a5ff77a51e5f30c22b36 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-tidypredict: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-tidypredict): Update to 1.0.0. [native-inputs]: Add r-glmnet and r-modeldata. Change-Id: I1ee1c298be915288a914b2f9930017929561b27c Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-spatstat: Update to 3.5-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-spatstat): Update to 3.5-0. Change-Id: I6bec30ae6ff1d4c18063743b9d46d44c1b3f504f Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-spatstat-linnet: Update to 3.4-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-spatstat-linnet): Update to 3.4-0. Change-Id: I54f02adfb200c082f364e82f1ca6d6988b6dcdf6 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-patrick: Update to 0.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-patrick): Update to 0.3.1. [native-inputs]: Remove r-testthat. Change-Id: I1df6171acc0b8696e77c275e81d5412a9eb1aff2 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-xgboost: Update to 3.1.2.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-xgboost): Update to 3.1.2.1. [native-inputs]: Remove r-vcd; add r-rhpcblasctl and r-survival. Change-Id: I6e03463314e11b7d46b01f3c232255a0dde5f68c Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-xml2: Update to 1.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-xml2): Update to 1.5.1. Change-Id: I933df15cdc8bbf796930a3775aef80d7ea59cef4 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-text2vec: Update to 0.6.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-text2vec): Update to 0.6.6. [native-inputs]: Add r-glmnet. Change-Id: If9ca1b1fcb2e5b78400c111bd0e1be817c7374ad Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-yulab-utils: Update to 0.2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-yulab-utils): Update to 0.2.2. Change-Id: Ie757bb52ba552a21a5373e22514090f01077b91d Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-performance: Update to 0.15.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-performance): Update to 0.15.3. Change-Id: Ib32ac03a853571ef09dcd68ae94d7487394e0bef Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-doby: Update to 4.7.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-doby): Update to 4.7.1. [propagated-inputs]: Add r-forecast and r-purrr. [native-inputs]: Remove r-geepack, r-lme4, and r-multcomp. Change-Id: Idb09f561eea127248e353a7aaa96eb965fae254c Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-piton: Update to 1.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-piton): Update to 1.0.1. Change-Id: I6c74e3ec1313c53057bf3f4cbd2109dcdea25600 Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2026-01-25gnu: r-getoptlong: Update to 1.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-getoptlong): Update to 1.1.0. Change-Id: I20221b19aa67f4e8667fdf2a60de796a341cb6e4 Signed-off-by: Rutherther <rutherther@ditigal.xyz>