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2026-04-02gnu: r-enrichplot: Update to 1.30.5.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.30.5. Change-Id: I5e3ee050327a5ea536e46a8136f2349e4440aefe
2026-04-02gnu: r-systempiper: Update to 2.16.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.16.4. Change-Id: Iac7cf251a58614b71e3d2c82e52a7180f44a55a8
2026-04-02gnu: r-gsva: Update to 2.4.7.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-gsva): Update to 2.4.7. Change-Id: I0b8d1dbf0d5563463b7af9ecf3ac5617a19c679e
2026-04-02gnu: r-anndatar: Update to 1.0.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-anndatar): Update to 1.0.2. Change-Id: Ib9e3b5a62fad67efa950b8ab50ac7ee5645f5f85
2026-04-02gnu: r-textclean: Update to 0.9.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-textclean): Update to 0.9.7. Change-Id: I4d650d0387f83dbe359af27b58b8ce619ab2d1d0
2026-04-02gnu: r-ragg: Update to 1.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ragg): Update to 1.5.1. Change-Id: If45af0b4579134653be64051ff38932880f8f935
2026-04-02gnu: r-textshaping: Update to 1.0.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-textshaping): Update to 1.0.5. Change-Id: I373f69797d6cadc90e07f014a9168d96955551c8
2026-04-02gnu: r-forestplot: Update to 3.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-forestplot): Update to 3.2.0. Change-Id: I412bf585c4b1e15a5206d2e9a1552a58d3afe5f5
2026-04-02gnu: r-actuar: Update to 3.3-7.Ricardo Wurmus
* gnu/packages/cran.scm (r-actuar): Update to 3.3-7. Change-Id: I6e0731a6ff02e411720777cf428d1f757caef6d7
2026-04-02gnu: r-systemfonts: Update to 1.3.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-systemfonts): Update to 1.3.2. Change-Id: Ib82e9f1fc04b19a5711424f4df4b8a711771f21e
2026-04-02gnu: r-leidenalg: Update to 1.1.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-leidenalg): Update to 1.1.6. Change-Id: Id8bd7bbeb357b40258ddd42076f8cdd8e8205f03
2026-04-02gnu: r-ggpattern: Update to 1.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggpattern): Update to 1.3.1. Change-Id: I405ae568a2fa2677e016a99d485214e87ae2689c
2026-04-02gnu: r-testit: Update to 0.17.Ricardo Wurmus
* gnu/packages/cran.scm (r-testit): Update to 0.17. Change-Id: I8d3c8b9255a8dca9574532a1ed3162824b6f34e7
2026-04-02gnu: r-gmisc: Update to 3.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-gmisc): Update to 3.2.0. [native-inputs]: Remove r-boot and r-rms; add r-bench and r-vdiffr. Change-Id: I113c5a2c5dd203b1239940f8b3a9373d17e742a6
2026-04-02gnu: r-ddrtree: Update to 0.1.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-ddrtree): Update to 0.1.6. Change-Id: I3627152d3ed65e78d08e2e8147779ff3c1247c23
2026-04-02gnu: r-rgl: Update to 1.3.36.Ricardo Wurmus
* gnu/packages/cran.scm (r-rgl): Update to 1.3.36. Change-Id: I49d1cbd90ed4104485432f5f4b004737749d92b4
2026-04-02gnu: r-rcppparallel: Update to 5.1.11-2.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.1.11-2. Change-Id: I7dc07cf9335d66d05a6848819a7413bbcd68a6ef
2026-04-02gnu: r-lmertest: Update to 3.2-1.Ricardo Wurmus
* gnu/packages/cran.scm (r-lmertest): Update to 3.2-1. Change-Id: I05dcfe993121b3dcbf162e1c5de4840a8b2ca60a
2026-04-02gnu: r-libcoin: Update to 1.0-11.Ricardo Wurmus
* gnu/packages/cran.scm (r-libcoin): Update to 1.0-11. Change-Id: Ife13b483454bd766b2c7139795b51599ed9da46b
2026-04-02gnu: r-emmeans: Update to 2.0.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-emmeans): Update to 2.0.2. Change-Id: I15ccc9678d5f000c9779e3f693a0a607a666fbfa
2026-04-02gnu: r-nleqslv: Update to 3.3.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-nleqslv): Update to 3.3.6. Change-Id: I7534f409a5c02a3218f3054bb235fd3b95e8e195
2026-04-02gnu: r-flashclust: Update to 1.1-4.Ricardo Wurmus
* gnu/packages/cran.scm (r-flashclust): Update to 1.1-4. Change-Id: If8b3c69cdd80e85cb2ebab8b2671902f0be6ae58
2026-04-02gnu: r-renv: Update to 1.1.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-renv): Update to 1.1.8. Change-Id: Iff24ede74a488cf72ea3ff12bcc97049a0736680
2026-04-02gnu: r-later: Update to 1.4.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-later): Update to 1.4.8. Change-Id: Iace0e377c69a3034dc16b82f8c0223e17fb35acd
2026-04-02gnu: r-n2r: Update to 1.0.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-n2r): Update to 1.0.4. Change-Id: Ia9e8a450d30a2f539e24d11035b1f7fe2816e138
2026-04-02gnu: r-rmysql: Update to 0.11.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-rmysql): Update to 0.11.2. Change-Id: Ib309b60c336ccddad4beff5de1af6ff011fa372c
2026-04-02gnu: r-partykit: Update to 1.2-26.Ricardo Wurmus
* gnu/packages/cran.scm (r-partykit): Update to 1.2-26. Change-Id: Ica2b504c1b07c94e60a722614472c2ab191efec5
2026-04-02gnu: r-mirt: Update to 1.46.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-mirt): Update to 1.46.1. [propagated-inputs]: Add r-splines2. Change-Id: I82430ecb16b5422b83b0967929d2ae28047bc7b7
2026-04-02gnu: r-shinymeta: Update to 0.2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-shinymeta): Update to 0.2.2. Change-Id: I68a425f8fc73f87a2edd577769b43882ee8205ee
2026-04-02gnu: r-httpgd: Update to 2.1.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-httpgd): Update to 2.1.4. Change-Id: Ie3c6a7a44dee59e7453f30a976279ac5a04de519
2026-04-02gnu: r-highr: Update to 0.12.Ricardo Wurmus
* gnu/packages/cran.scm (r-highr): Update to 0.12. Change-Id: Ifa81b636ed88b342b0db65cf64b5483c4150cc02
2026-04-02gnu: r-tglkmeans: Update to 0.6.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-tglkmeans): Update to 0.6.1. [propagated-inputs]: Remove r-ggplot2 and r-plyr. Change-Id: I150d5ea1a89cf64bcaadac0f65a19869ea665827
2026-04-02gnu: r-vegan: Update to 2.7-3.Ricardo Wurmus
* gnu/packages/cran.scm (r-vegan): Update to 2.7-3. Change-Id: Ife9607438db6d1cb4e9cb9de5671d257d49365b2
2026-04-02gnu: r-mirai: Update to 2.6.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-mirai): Update to 2.6.1. Change-Id: I7db0ee77e98d3a897845341e774597e99073d5e6
2026-04-02gnu: r-lme4: Update to 2.0-1.Ricardo Wurmus
* gnu/packages/cran.scm (r-lme4): Update to 2.0-1. Change-Id: I51b587b69202c3ab48e0b4b6f0ff8d31dfbfb184
2026-04-02gnu: r-ggstats: Update to 0.13.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggstats): Update to 0.13.0. Change-Id: I67d6a0c35e596f2ca291f973524a42a61bfa8d3c
2026-04-02gnu: r-cubist: Update to 0.6.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-cubist): Update to 0.6.0. [native-inputs]: Add r-dplyr, r-mlbench, and r-withr. Change-Id: I3156f66a389c0aacd57506c3a1663256e604cb50
2026-04-02gnu: r-bayesfactor: Update to 0.9.12-4.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-bayesfactor): Update to 0.9.12-4.8. Change-Id: Ia125c84226b5bf04b65b37085857e2c219fac1dc
2026-04-02gnu: r-microbiomestat: Update to 1.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-microbiomestat): Update to 1.4. [propagated-inputs]: Remove r-bbmisc, r-lhs, r-mlr, r-mlrmbo, r-paramhelpers, and r-smoof; add r-bbotk, r-mlr3, r-mlr3mbo, and r-paradox. Change-Id: Idc8342d33e47af8a4f9b0d104bce410dfca9417d
2026-04-02gnu: r-codedepends: Update to 0.6.7.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-codedepends): Update to 0.6.7. Change-Id: I9d35a67f25515137d58bc45f7dc8468f99f56395
2026-04-02gnu: r-xllim: Update to 2.3.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-xllim): Update to 2.3.1. Change-Id: I0881a5df658b4ea7c6e76c5f17ca6f0c98da1753
2026-04-02gnu: r-rcppgsl: Update to 0.3.14.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppgsl): Update to 0.3.14. [propagated-inputs]: Move gsl from here... [inputs]: ...to here. Change-Id: Ibac2ab81b38205364fc7f810024ac45968fc3de0
2026-04-02gnu: r-fs: Update to 1.6.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-fs): Update to 1.6.7. [native-inputs]: Add pkg-config. Change-Id: I34d6a0609723c0aef709844f46b637caae9eee4d
2026-04-02gnu: r-factoextra: Update to 2.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-factoextra): Update to 2.0.0. [propagated-inputs]: Remove r-abind, r-reshape2, and r-tidyr; add r-rlang. [native-inputs]: Add r-testthat. Change-Id: If3b8016e74fc6002837b0020576f51e67cd517cb
2026-04-02gnu: r-cvxr: Update to 1.8.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-cvxr): Update to 1.8.1. [arguments]: Enable all tests. [propagated-inputs]: Remove r-bit64, r-ecosolver, and r-rmpfr; add r-clarabel, r-highs, r-s7, and r-slam. Change-Id: Ibd5ef85da179a1f0a4c77f4b285e29bcc8794cea
2026-04-02gnu: neomutt: Update to 20260105.Nguyễn Gia Phong
* gnu/packages/mail.scm (neomutt): Update to 20260105. [native-inputs]: Update neomutt-test-files to commit c769cdefd45b. Add autosetup and remove its transitive dependency tcl. [source]: Add snippet and its required modules to unbundle autosetup. [arguments] <phases>: {configure}: Invoke autosetup directly. {prepare-test-files}: Re-enable test_mutt_sig_exit_handler. <configure-flags>: Move --prefix to the definition of the configure phase. Remove --ssl=1 which now conflicts with --gnutls. Add --enable-autocrypt. [inputs]: Add sqlite for autocrypt support. Change-Id: I604876d66623bdc7d799d86962f60e437003f57f Merges: https://codeberg.org/guix/guix/pulls/4835 Reviewed-by: Simon Tournier <zimon.toutoune@gmail.com>
2026-04-02gnu: neomutt: Improve style.Nguyễn Gia Phong
* gnu/packages/mail.scm (neomutt)[arguments]: Update to modern style. Change-Id: Ic2a5e2dab7c2d87b0bd54e6988d8193d0788db2d Reviewed-by: Simon Tournier <zimon.toutoune@gmail.com>
2026-04-02gnu: Add autosetup.Nguyễn Gia Phong
* gnu/packages/build-tools.scm (autosetup): New variable. Change-Id: Id285a64fa4128c79ed3247f64d17a9d58cf3211a Reviewed-by: Simon Tournier <zimon.toutoune@gmail.com> Reviewed-by: Maxim Cournoyer <maxim@guixotic.coop>
2026-04-02gnu: praat: Update to 6.4.62.Patrick Norton
* gnu/packages/language.scm (praat): Update to 6.4.62. Change-Id: I3a0f53f2f670d7825ab55f499a2735ba5f4c95b1 Merges: https://codeberg.org/guix/guix/pulls/7610 Signed-off-by: Nguyễn Gia Phong <cnx@loang.net>
2026-04-02gnu: udiskie: Update to 2.6.2.Patrick Norton
* gnu/packages/freedesktop.scm (udiskie): Update to 2.6.2. Change-Id: I13b2eae5bfb4f39ce0a4e1fd728677ddc4240ae3 Merges: https://codeberg.org/guix/guix/pulls/7608 Signed-off-by: Nguyễn Gia Phong <cnx@loang.net>
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