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2026-04-28gnu: r-htmltools: Propagate r-markdown.John Dawson
The `includeMarkdown` function requires the `markdown` package. See https://rstudio.github.io/htmltools/reference/include.html#note * gnu/packages/cran.scm (r-htmltools)[propagated-inputs]: For htmltools::includeMarkdown, add r-markdown. Change-Id: If0b7b9a19610177fcfc02357cf1462a8704592ab
2026-04-28gnu: r-mlr3misc: Skip one test.Ricardo Wurmus
* gnu/packages/cran.scm (r-mlr3misc)[arguments]: Declare one skipped test. Change-Id: I5d007a6b40dbb9c014a1ff6785815d14fcd37a3c
2026-04-28gnu: r-mlr3mbo: Update to 1.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-mlr3mbo): Update to 1.1.1. [native-inputs]: Remove r-redux and r-rush. Change-Id: Ibdac6ba5a45567f2e73884b092f45869056fea95
2026-04-28gnu: r-harmony: Update to 2.0.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-harmony): Update to 2.0.2. [propagated-inputs]: Add r-cli. Change-Id: If8e8d1df986836752cf2eca7934f7a3cd62a1c71
2026-04-28gnu: r-rush: Update to 1.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rush): Update to 1.1.0. Change-Id: I5b5c462f1e00991004bdbd9f9b2593fa4da3b015
2026-04-28gnu: r-officer: Update to 0.7.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-officer): Update to 0.7.4. Change-Id: Ice4843e191ff9d1a4e286251c9ad8e071fa942ac
2026-04-28gnu: r-rcpp: Update to 1.1.1-1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcpp): Update to 1.1.1-1.1. [native-inputs]: Add r-tinytest. Change-Id: I5837d47ea13fdcc0559506fa48adf2fe0e6dbf34
2026-04-28gnu: r-mlr3filters: Update to 0.9.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-mlr3filters): Update to 0.9.1. Change-Id: If13b74e209d8af025b41427f52a91e3d8d02ea5a
2026-04-28gnu: r-directlabels: Update to 2026.4.23.Ricardo Wurmus
* gnu/packages/cran.scm (r-directlabels): Update to 2026.4.23. [native-inputs]: Add r-ggplot2. Change-Id: I34f188fc7e777385b60383b46087802e47342d37
2026-04-28gnu: r-irace: Update to 4.4.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-irace): Update to 4.4.3. Change-Id: I6065972a7ef46994933b70e45c79a9227f140f76
2026-04-28gnu: r-statsexpressions: Update to 2.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-statsexpressions): Update to 2.0.0. [propagated-inputs]: Remove r-magrittr and r-zeallot. Change-Id: Ib31f2c8b6510d1ba0e302d424665fa4db40afde7
2026-04-28gnu: r-ggstatsplot: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggstatsplot): Update to 1.0.0. [propagated-inputs]: Remove r-magrittr; add r-forcats. [native-inputs]: Add r-lme4 and r-patrick. Change-Id: I888d0c7a2a5b3da10b0784357841a498e972f66d
2026-04-28gnu: r-tidymodels: Update to 1.5.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-tidymodels): Update to 1.5.0. Change-Id: Iccaeb84fa737ce94fad6544e04660b5998db6693
2026-04-28gnu: r-nanotime: Update to 0.3.14.Ricardo Wurmus
* gnu/packages/cran.scm (r-nanotime): Update to 0.3.14. Change-Id: I3e66db61984ddca8795adf8af5a46b0a79d4aa63
2026-04-28gnu: r-rferns: Update to 6.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rferns): Update to 6.0.0. Change-Id: I47d543dbcd7b37db6bb70b82e8d3096d265fa58a
2026-04-28gnu: r-extradistr: Update to 1.10.0.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-extradistr): Update to 1.10.0.3. [native-inputs]: Add r-actuar, r-evd, r-laplacesdemon, r-mcmcpack, and r-vgam. Change-Id: I93a7554a09633d23e48e1f0f0eff6a83930e6bdd
2026-04-28gnu: r-s7: Update to 0.2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-s7): Update to 0.2.2. Change-Id: I11a4924f63a6e94042dd8ed5445737dfb27c59f8
2026-04-28gnu: r-processx: Update to 3.9.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-processx): Update to 3.9.0. Change-Id: I61d8fe12cbd47f979f4983a5b64fce9391934b4e
2026-04-28gnu: r-rmpi: Update to 0.7-3.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-rmpi): Update to 0.7-3.4. Change-Id: I560a6a29db7f61c09661978bd6b114de9006ac43
2026-04-28gnu: r-ggtangle: Update to 0.1.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggtangle): Update to 0.1.2. Change-Id: Id42ee31afad6095fc0c288894c0cef1b253f3ae3
2026-04-28gnu: r-fastdummies: Update to 1.7.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-fastdummies): Update to 1.7.6. [native-inputs]: Add r-dplyr. Change-Id: I5bdb6d7745c7540e6526be2723630e70b5b6f793
2026-04-28gnu: r-bit64: Update to 4.8.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-bit64): Update to 4.8.0. [arguments]: Disable tests. [native-inputs]: Add r-withr. Change-Id: Ide6944f6cf973333bb8aa1fabdb85a988a4d26db
2026-04-28gnu: Add r-ddpcr.Spencer King
* gnu/packages/cran.scm (r-ddpcr): New variable. Change-Id: Idf3d2d05f8db51ff1cf6866b4241c90eb30587b4
2026-04-28gnu: r-qs2: Update to 0.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-qs2): Update to 0.2.0. Change-Id: I6eadd1c2170e7809264542055696b67c63896c2d
2026-04-28gnu: r-seurat: Update to 5.5.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-seurat): Update to 5.5.0. Change-Id: I36d53c2d9b2a52e63cc334c7a1d259647e9da52a
2026-04-28gnu: r-igraph: Update to 2.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-igraph): Update to 2.3.0. Change-Id: I9e51ac04d61a98e1206e9b563fda63eff5c6d090
2026-04-28gnu: r-tweedie: Update to 3.0.19.Ricardo Wurmus
* gnu/packages/cran.scm (r-tweedie): Update to 3.0.19. Change-Id: Ie7e0d663d4ea12d4e30fe7b719e9f8765c001223
2026-04-28gnu: r-pkgload: Update to 1.5.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-pkgload): Update to 1.5.2. Change-Id: Id40f5db0981b34480b9ed74da5b5115155be3911
2026-04-28gnu: r-curl: Update to 7.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-curl): Update to 7.1.0. Change-Id: If5f59d82aec252a18f475dff7cbe4e28433db492
2026-04-28gnu: r-jose: Update to 2.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-jose): Update to 2.0.0. Change-Id: Ife28bbdda55565d92ea7eacaae3841a0787ffa7c
2026-04-28gnu: r-ggplot2: Update to 4.0.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggplot2): Update to 4.0.3. Change-Id: If2145292a83a924bfa56477a63ef5d80eb57ca7c
2026-04-28gnu: r-stringfish: Update to 0.19.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-stringfish): Update to 0.19.0. [arguments]: Enable tests; remove phase 'relax-gcc-14-strictness. [native-inputs]: Remove r-dplyr, r-rlang, and r-stringr. Change-Id: I61585d3136f6c833cf3e5ca8b07b58746865f95f
2026-04-28gnu: r-htmltable: Update to 2.5.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-htmltable): Update to 2.5.0. [properties]: Record updater-ignored-native-inputs. [arguments]: Use generated label for jquery origin. [native-inputs]: Drop labels; add r-chron, r-glue, r-lubridate, r-tibble, and r-tidyverse. Change-Id: I0d33bc2f39caca65a42de6569a9927deaf889a76
2026-04-28gnu: r-rcpparmadillo: Skip one test on 32-bit systems.Ricardo Wurmus
One test in this file fails with an inaccurate comparison, but we cannot disable just that one test, so we skip the whole file. * gnu/packages/cran.scm (r-rcpparmadillo)[arguments]: Conditionally skip a test file. Change-Id: I29d9bd12fd63c87fd6bb232238418679d079138a
2026-04-28gnu: r-hrbrthemes: Update to 0.9.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-hrbrthemes): Update to 0.9.3. [propagated-inputs]: Remove r-extrafont and r-gdtools. [native-inputs]: Add r-vdiffr. Change-Id: I6bd2f6462f672b4e4f762c057dc4d7d39f82c6ab
2026-04-28gnu: r-eulerr: Update to 7.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-eulerr): Update to 7.1.0. Change-Id: I0b10fa1a0c9311ea9781d836f5e023f542ced9af
2026-04-28gnu: r-testit: Update to 0.18.Ricardo Wurmus
* gnu/packages/cran.scm (r-testit): Update to 0.18. Change-Id: Ic8279260cfe7a6a7ad158b0c70c0b89bba9c41a9
2026-04-28gnu: r-nanoparquet: Update to 0.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-nanoparquet): Update to 0.5.1. [native-inputs]: Add r-blob. Change-Id: I8cfdf27e5a001b45937a25a263f28b33fc8ff352
2026-04-28gnu: r-ps: Update to 1.9.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-ps): Update to 1.9.3. Change-Id: I143a8373efd9e27605a1b1ef36f29c40e6390f9c
2026-04-28gnu: r-v8: Update to 8.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-v8): Update to 8.2.0. Change-Id: Iefd27adab0e62241c06137355f2bd8d756dd520e
2026-04-28gnu: r-rcpparmadillo: Update to 15.2.6-1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcpparmadillo): Update to 15.2.6-1. [native-inputs]: Add r-rcpp. Change-Id: Ie65583b32261f6acf6cb93b985f96933f97f0b88
2026-04-28gnu: r-patrick: Enable tests.Ricardo Wurmus
* gnu/packages/cran.scm (r-patrick)[arguments]: Enable all tests. Change-Id: Icaf4bc4a28063e0261691d3010e5a713450ade33
2026-04-28gnu: r-randomforestsrc: Update to 3.6.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-randomforestsrc): Update to 3.6.2. Change-Id: I7bd3269e88d7e58bf4d5563a085a391c20157f89
2026-04-28gnu: r-pdftools: Update to 3.8.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-pdftools): Update to 3.8.0. Change-Id: Ida05e42c4d93be13875f448d29096d37a72d40fd
2026-04-28gnu: r-readods: Update to 2.3.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-readods): Update to 2.3.5. [propagated-inputs]: Add r-withr. [native-inputs]: Remove r-withr. Change-Id: Ib6a4facb563639d0f280c870a53c3515801a0f87
2026-04-28gnu: r-mlr3measures: Update to 1.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-mlr3measures): Update to 1.3.0. Change-Id: Iad5b8b73e6afcbb1143c2df1130e4a4cac5aa48c
2026-04-28gnu: r-seuratobject: Update to 5.4.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-seuratobject): Update to 5.4.0. Change-Id: I801715aed3324218b8ae96f4d70aae1f6d7622d7
2026-04-28gnu: r-parsnip: Update to 1.5.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-parsnip): Update to 1.5.0. [propagated-inputs]: Remove r-withr. [native-inputs]: Add r-withr. Change-Id: I84d1f39c0505715a57a54cb4a5889c27aa37e0c5
2026-04-28gnu: r-tune: Update to 2.1.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-tune): Update to 2.1.0. [propagated-inputs]: Remove r-gpfit; add r-gaupro and r-lifecycle. Change-Id: Ia7490b10f965715e3a387da7b91d40c9fc5b692d
2026-04-28gnu: r-dials: Update to 1.4.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-dials): Update to 1.4.3. Change-Id: Iab09779cf00f1c9d376ad7309271fbd51cfe89f5